TBLASTN 7.6.0


Query=uc004foi
       |X_random|NM_015975|Q9HBM6|TAF9B_HUMAN|TAF9B|NM_015975|NP_057059|transcr
       iption associated factor 9B
        (251 letters)

Database: Zv8_masked;
          14,546 sequences; 493,649,665 total letters
                                                                  Score    E

Zv8_masked||Zv8_NA957 |chrNA|Len:3444                                   93   7e-018
Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|e...     93   7e-018
Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|e...     93   7e-018
Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|e...     86   7e-016
Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|e...     86   7e-016
Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|e...     75   2e-012
Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|e...     75   2e-012
Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|e...     52   2e-005
Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|e...     52   2e-005
Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|e...     44   0.003
Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|e...     44   0.003
Zv8_masked||Zv8_NA957 |chrNA|Len:3444                                   44   0.005

>Zv8_masked||Zv8_NA957 |chrNA|Len:3444

          Length = 3444

 Score =  93 bits (229), Expect = 7e-018
 Identities = 43/45 (95%)
 Frame = +1

Query:   91 FLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRLKSLIKK 135
            |||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 1387 FLLDIARQKNQTPLPLIKPYTGPRLPPDRYCLTAPNYRLKSLQKK 1521

>Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|end:41592240

          Length = 2005789

 Score =  93 bits (229), Expect = 7e-018
 Identities = 43/45 (95%)
 Frame = +2

Query:     91 FLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRLKSLIKK 135
              |||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 967619 FLLDIARQKNQTPLPLIKPYTGPRLPPDRYCLTAPNYRLKSLQKK 967753

>Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|end:41592240

          Length = 2005789

 Score =  93 bits (229), Expect = 7e-018
 Identities = 43/45 (95%)
 Frame = -2

Query:     91 FLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRLKSLIKK 135
              |||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 851331 FLLDIARQKNQTPLPLIKPYTGPRLPPDRYCLTAPNYRLKSLQKK 851197

>Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|end:41592240

          Length = 2005789

 Score =  86 bits (212), Expect = 7e-016
 Identities = 40/52 (76%), Positives = 46/52 (88%)
 Frame = +1

Query:     39 MLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQCRADQSFTSPPPRD 90
              .| |   |||||..||||||.|||| .|||||.||||||| |||||||||||
Sbjct: 967372 LLIFFSGYVTTIIEDAKIYSAHAKKSSVDADDIRLAIQCRVDQSFTSPPPRD 967527

>Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|end:41592240

          Length = 2005789

 Score =  86 bits (212), Expect = 7e-016
 Identities = 40/52 (76%), Positives = 46/52 (88%)
 Frame = -1

Query:     39 MLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQCRADQSFTSPPPRD 90
              .| |   |||||..||||||.|||| .|||||.||||||| |||||||||||
Sbjct: 851578 LLIFFSGYVTTIIEDAKIYSAHAKKSSVDADDIRLAIQCRVDQSFTSPPPRD 851423

>Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|end:41592240

          Length = 2005789

 Score =  75 bits (182), Expect = 2e-012
 Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = +2

Query:    199 PATTAVQNVLINPSMIGPKNILITTNMVSSQNTANEANPLKRKHEDDDDNDIM 251
              | |  |||||||||.|| |||||||||| |||...|.  |||||||.|| | .
Sbjct: 972308 PTTPTVQNVLINPSLIGSKNILITTNMV-SQNSSSESTSLKRKHEDEDDYDAL 972463

>Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|end:41592240

          Length = 2005789

 Score =  75 bits (182), Expect = 2e-012
 Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = -3

Query:    199 PATTAVQNVLINPSMIGPKNILITTNMVSSQNTANEANPLKRKHEDDDDNDIM 251
              | |  |||||||||.|| |||||||||| |||...|.  |||||||.|| | .
Sbjct: 846641 PTTPTVQNVLINPSLIGSKNILITTNMV-SQNSSSESTSLKRKHEDEDDYDAL 846486

>Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|end:41592240

          Length = 2005789

 Score =  52 bits (122), Expect = 2e-005
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +2

Query:     18 VMAQILKDMGITEYEPRVINQMLEFAF 44
              || |||||||||||||||.|||||| .
Sbjct: 966647 VMMQILKDMGITEYEPRVVNQMLEFTY 966727

>Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|end:41592240

          Length = 2005789

 Score =  52 bits (122), Expect = 2e-005
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -2

Query:     18 VMAQILKDMGITEYEPRVINQMLEFAF 44
              || |||||||||||||||.|||||| .
Sbjct: 852303 VMMQILKDMGITEYEPRVVNQMLEFTY 852223

>Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|end:41592240

          Length = 2005789

 Score =  44 bits (103), Expect = 0.003
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = +2

Query:    162 TPQTVSVPNKVATPMSVTSQRFTVQIPPSQSTPVK 196
              ||   .|  || ||.|.| |||||||| ||.  ||
Sbjct: 970472 TPSVQTVGTKVGTPVSLTGQRFTVQIPSSQTASVK 970576

>Zv8_masked||Zv8_scaffold2517 |chr21|Len:2005789|start:39586452|end:41592240

          Length = 2005789

 Score =  44 bits (103), Expect = 0.003
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = -2

Query:    162 TPQTVSVPNKVATPMSVTSQRFTVQIPPSQSTPVK 196
              ||   .|  || ||.|.| |||||||| ||.  ||
Sbjct: 848478 TPSVQTVGTKVGTPVSLTGQRFTVQIPSSQTASVK 848374

>Zv8_masked||Zv8_NA957 |chrNA|Len:3444

          Length = 3444

 Score =  44 bits (101), Expect = 0.005
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query:   71 VRLAIQCRADQSFTSPPPRD 90
            .||||||| |||||||||||
Sbjct: 1236 IRLAIQCRVDQSFTSPPPRD 1295

 
    Posted date:  Mon Feb 02 16:56:45 2009
  Number of letters in database: 493,649,665
  Number of sequences in database:  14,546

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,102,829,613
Number of Sequences: 14546
Number of Extensions: 3102829613
Number of Successful Extensions: 107885198
Number of sequences better than 0.0: 0
TBLASTN 7.6.0