TBLASTN 7.6.0


Query=uc003msq
       |5_h2_hap1|NM_004291|Q16568|CART_HUMAN|CARTPT|NM_004291|NP_004282|cocain
       e- and amphetamine-regulated transcript
        (116 letters)

Database: Zv8_masked;
          14,546 sequences; 493,649,665 total letters
                                                                  Score    E

Zv8_masked||Zv8_scaffold181 |chr2|Len:4336603|start:32623241|end...     71   4e-012
Zv8_masked||Zv8_scaffold938 |chr7|Len:93408|start:54803984|end:5...     70   7e-012
Zv8_masked||Zv8_scaffold2906 |chr25|Len:2906493|start:17751872|e...     70   9e-012
Zv8_masked||Zv8_scaffold2629 |chr22|Len:467683|start:38592114|en...     64   7e-010
Zv8_masked||Zv8_NA3997 |chrNA|Len:25631                                 64   7e-010
Zv8_masked||Zv8_scaffold934 |chr7|Len:2328545|start:51564276|end...     57   6e-008
Zv8_masked||Zv8_scaffold2906 |chr25|Len:2906493|start:17751872|e...     44   7e-004
Zv8_masked||Zv8_scaffold2629 |chr22|Len:467683|start:38592114|en...     41   0.006

>Zv8_masked||Zv8_scaffold181 |chr2|Len:4336603|start:32623241|end:36959843

          Length = 4336603

 Score =  71 bits (173), Expect = 4e-012
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = -1

Query:      82 CDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL 116
               ||||||||.|||||.|||| ||.||||. |.||||
Sbjct: 2354362 CDAGEQCAIRKGARVGKLCSCPQGTSCHFFILKCL 2354258

>Zv8_masked||Zv8_scaffold938 |chr7|Len:93408|start:54803984|end:54897391

          Length = 93408

 Score =  70 bits (171), Expect = 7e-012
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +1

Query:    82 CDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL 116
             || |||||.|||.||||.||||||  || ||||||
Sbjct: 41986 CDVGEQCAIRKGSRIGKMCDCPRGAFCNYFLLKCL 42090

>Zv8_masked||Zv8_scaffold2906 |chr25|Len:2906493|start:17751872|end:20658364

          Length = 2906493

 Score =  70 bits (170), Expect = 9e-012
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -1

Query:      82 CDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL 116
               || |||||.|||.||||.||||||  || ||||||
Sbjct: 2367222 CDLGEQCAIRKGSRIGKMCDCPRGALCNFFLLKCL 2367118

>Zv8_masked||Zv8_scaffold2629 |chr22|Len:467683|start:38592114|end:39059796

          Length = 467683

 Score =  64 bits (154), Expect = 7e-010
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +1

Query:     82 CDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL 116
              ||||||||||||.| |||| || ||.|.  .||||
Sbjct: 425470 CDAGEQCAVRKGSRFGKLCSCPGGTACSFSILKCL 425574

>Zv8_masked||Zv8_NA3997 |chrNA|Len:25631

          Length = 25631

 Score =  64 bits (154), Expect = 7e-010
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +3

Query:    82 CDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL 116
             ||||||||||||.| |||| || ||.|.  .||||
Sbjct: 24378 CDAGEQCAVRKGSRFGKLCSCPGGTACSFSILKCL 24482

>Zv8_masked||Zv8_scaffold934 |chr7|Len:2328545|start:51564276|end:53892820

          Length = 2328545

 Score =  57 bits (137), Expect = 6e-008
 Identities = 22/35 (62%), Positives = 29/35 (82%)
 Frame = +1

Query:    82 CDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL 116
             |  | .||.| |.| ||||.| ||..||||||||.
Sbjct: 40312 CALGSRCAMRLGSRFGKLCECGRGSNCNSFLLKCI 40416

>Zv8_masked||Zv8_scaffold2906 |chr25|Len:2906493|start:17751872|end:20658364

          Length = 2906493

 Score =  44 bits (102), Expect = 7e-004
 Identities = 19/26 (73%), Positives = 25/26 (96%)
 Frame = -2

Query:      56 ALQEVLKKLKSKRVPIYEKKYGQVPM 81
               ||||||.||..||.| .|||.|||||
Sbjct: 2367977 ALQEVLEKLQTKRIPPWEKKFGQVPM 2367900

>Zv8_masked||Zv8_scaffold2629 |chr22|Len:467683|start:38592114|end:39059796

          Length = 467683

 Score =  41 bits (94), Expect = 0.006
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
 Frame = +2

Query:     26 RAQEDAELQPRALDIYSAVDDASHEKEL----IEALQEVLKKLKSKRVPIYEKKYGQVP 80
              .|||. ||  |.| .  ..  .   | .    ||||||||.||..|..|  ||| | ||
Sbjct: 422396 KAQEEKEL-VRSLALR*SLLSSQMRKTVLYL*IEALQEVLEKLRNKQIPAVEKKLGWVP 422569

 
    Posted date:  Mon Feb 02 16:56:45 2009
  Number of letters in database: 493,649,665
  Number of sequences in database:  14,546

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,280,994,843
Number of Sequences: 14546
Number of Extensions: 3280994843
Number of Successful Extensions: 106970508
Number of sequences better than 0.0: 0
TBLASTN 7.6.0