TBLASTN 7.6.0


Query=uc003mpf
       |5_h2_hap1|NM_002538|Q16625|OCLN_HUMAN|OCLN|NM_002538|NP_002529|occludin
        (522 letters)

Database: Zv8_masked;
          14,546 sequences; 493,649,665 total letters
                                                                  Score    E

Zv8_masked||Zv8_scaffold1241 |chr10|Len:362826|start:2805077|end...    192   3e-047
Zv8_masked||Zv8_scaffold1029 |chr8|Len:261486|start:13022758|end...    155   4e-036
Zv8_masked||Zv8_scaffold590 |chr5|Len:3284637|start:23294260|end...    121   6e-026
Zv8_masked||Zv8_scaffold590 |chr5|Len:3284637|start:23294260|end...     75   4e-012
Zv8_masked||Zv8_scaffold167 |chr2|Len:1987986|start:20408816|end...     64   8e-009
Zv8_masked||Zv8_scaffold590 |chr5|Len:3284637|start:23294260|end...     62   5e-008
Zv8_masked||Zv8_scaffold1241 |chr10|Len:362826|start:2805077|end...     50   2e-004
Zv8_masked||Zv8_scaffold1029 |chr8|Len:261486|start:13022758|end...     47   0.001
Zv8_masked||Zv8_scaffold1241 |chr10|Len:362826|start:2805077|end...     44   0.009
Zv8_masked||Zv8_scaffold590 |chr5|Len:3284637|start:23294260|end...     44   0.009

>Zv8_masked||Zv8_scaffold1241 |chr10|Len:362826|start:2805077|end:3167902

          Length = 362826

 Score =  192 bits (486), Expect = 3e-047
 Identities = 98/213 (46%), Positives = 129/213 (60%), Gaps = 8/213 (3%)
 Frame = -1

Query:     41 QPAYSFYPEDEILHFYKWTSPPGVIRILSMLIIVMCIAIFACVASTLAWD-----RGYGT 95
              |||||.||.||  |||.||||||.|.|. .| |. |. || |||||||||      |.||
Sbjct: 201033 QPAYSYYPDDEFQHFYRWTSPPGIIKIMCVLSIIFCVGIFVCVASTLAWDTNAGAAGFGT 200854

Query:     96 S--LLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDPRAAKGFMLAMAAFCFIAAL 153
              .                                      |||  ||||.|||   ||| .
Sbjct: 200853 NGGYYGGSYGGSYGSGFGGTGYGMGGAGSFGYGILGSQNDPRQGKGFMIAMAIITFIALM 200674

Query:    154 VIFVTSVIRSEMSRTRRYYLSVIIVSAILGIMVFIATIVYIMGVNPTAQSSGSLYGSQIY 213
              |||.  .    . . |..|||||||||.|   .|||||||.. | | ||.|||.  .|.|
Sbjct: 200673 VIFIMVISHQRVCQGRKFYLSVIIVSALLAFFMFIATIVYLVTVYPMAQTSGSVQFNQVY 200494

Query:    214 ALCNQFYTPAATGLYVDQYLYHYCVVDPQEAIA 246
              ..|   |  |    .|.|||||||||||||  |
Sbjct: 200493 SMC-AAYQQAQMSTFVNQYLYHYCVVDPQEVSA 200398

>Zv8_masked||Zv8_scaffold1029 |chr8|Len:261486|start:13022758|end:13284243

          Length = 261486

 Score =  155 bits (391), Expect = 4e-036
 Identities = 88/252 (34%), Positives = 126/252 (50%), Gaps = 13/252 (5%)
 Frame = -2

Query:      4 RPLESPPPYRPDEFKPNHYAPSNDIYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTSPPG 63
              .| .||| | |     | . |            |  . |   .  |.   ||||| ||||
Sbjct: 112760 QPYDSPPKYTPPS---NGFGPPGSFQDPRSEFDPYPAPPGSYYVGEEVPQHFYKWFSPPG 112590

Query:     64 VIRILSMLIIVMCIAIFACVASTLAWDR----GYGTSLL-XXXXXXXXXXXXXXXXXXXX 118
              ...|.   .||.|. ||||||||| ||     |||.                        
Sbjct: 112589 IVKIMIGTVIVLCLGIFACVASTLVWDMQYGYGYGSGYPGYGSGYGYGGGYGSYGYGSGY 112410

Query:    119 XXXXXXXXXXXXXTDPRAAKGFMLAMAAFCFIAALVIFVTSVIRSEMSRTRRYYLSVIIV 178
                             | .||  |.|.||  || ||  |  |  ..   |.|...|.|..|
Sbjct: 112409 GSGYGYGSYYNSYPTPYSAKTSMIAVAAINFIIALGFFAASFSKTNTFRSRKFFLAVLVV 112230

Query:    179 SAILGIMVFIATIVYIMGVNPTAQSSGSLYGSQIYALCNQFYTPAATGL-----YVDQYL 233
               .|. ..  |  ||||.|||| |||| | | . .  .|   |  . ||.       .|||
Sbjct: 112229 CSIMAVIQGIINIVYIVGVNPMAQSSSSSYYNPMLMMCQNLYGSSVTGMGAGFPVYNQYL 112050

Query:    234 YHYCVVDPQEAI 245
              |||| ||||| .
Sbjct: 112049 YHYCYVDPQEVL 112014

>Zv8_masked||Zv8_scaffold590 |chr5|Len:3284637|start:23294260|end:26578896

          Length = 3284637

 Score =  121 bits (303), Expect = 6e-026
 Identities = 56/112 (50%), Positives = 85/112 (75%), Gaps = 1/112 (0%)
 Frame = +1

Query:    133 DPRAAKGFMLAMAAFCFIAALVIFVTSVIRSEMSRTRRYYLSVIIVSAILGIMVFIATIV 192
              ||.. |||....||  ||| |.||.  | |   |.. ..||. ||. |||  .. |||||
Sbjct: 892030 DPKSGKGFIISIAAITFIAILIIFILVVSRQSSSQSPKFYLATIIICAILAALMLIATIV 892209

Query:    193 YIMGVNPTAQSSGSLYGSQIYALCNQFYT-PAATGLYVDQYLYHYCVVDPQE 243
              |.. ||||.|.|||.  .||  || |.     |.|....|||||||||||.|
Sbjct: 892210 YLVTVNPTSQTSGSMMYNQILQLCAQYQNQDQASGIFINQYLYHYCVVDPEE 892365

>Zv8_masked||Zv8_scaffold590 |chr5|Len:3284637|start:23294260|end:26578896

          Length = 3284637

 Score =  75 bits (184), Expect = 4e-012
 Identities = 32/51 (62%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = +1

Query:     40 SQPAYSFYPEDEILHFYKWTSPPGVIRILSMLIIVMCIAIFACVASTLAWD 90
              |    |..| ||.|||| | |||||..|| ..||.||.|.|||||.|||||
Sbjct: 891697 SHRTVSYHP-DEMLHFYSWKSPPGVMKILCIIIIIMCVAMFACVAATLAWD 891846

>Zv8_masked||Zv8_scaffold167 |chr2|Len:1987986|start:20408816|end:22396801

          Length = 1987986

 Score =  64 bits (155), Expect = 8e-009
 Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
 Frame = -3

Query:       7 ESPPPYRPDEFKPNHYAPSNDIYGGEMHVRPMLSQPAYSFYPE-----DEILHFYKWTSP 61
               .||| | |      ||   ...|              ||  |.         |||.| ||
Sbjct: 1833856 DSPPQYSP------HYTAPSNMYTSRSFYSQRSEFGLYSSVPDAPHALGNPQHFYRWFSP 1833695

Query:      62 PGVIRILSMLIIVMCIAIFACVASTLAWDR-GYGTSL 97
               ||... .  |  ..|  ||||||||| ||  ||  |.
Sbjct: 1833694 PGIVKTMEGLTALLCFIIFACVASTLVWDMPGYEGSI 1833584

>Zv8_masked||Zv8_scaffold590 |chr5|Len:3284637|start:23294260|end:26578896

          Length = 3284637

 Score =  62 bits (148), Expect = 5e-008
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = +2

Query:    417 IREYPPITSDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSRLDKELDDYREESEEYM 475
              . ||||| ..|.|  |||.||     || ||.|||.||. |.  |.|||   | | ..|
Sbjct: 895715 LSEYPPIINEQERLEYKRDFDRDHMVYKRLQAELDDINQGLADADRELDRLEEGSPQFM 895891

>Zv8_masked||Zv8_scaffold1241 |chr10|Len:362826|start:2805077|end:3167902

          Length = 362826

 Score =  50 bits (117), Expect = 2e-004
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = -2

Query:    490 SADYKSKKNHCKQLKSKLSHIKKMVGDYDRQ 520
              | .|| ||  || ||.||.|||||| ||||.
Sbjct: 188021 SGEYKQKKKRCKYLKAKLNHIKKMVSDYDRR 187929

>Zv8_masked||Zv8_scaffold1029 |chr8|Len:261486|start:13022758|end:13284243

          Length = 261486

 Score =  47 bits (110), Expect = 0.001
 Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
 Frame = -1

Query:   369 SSGGNFETPSKRAPAKGRAGRSKRT---EQDHYETDYTTGGESCDELEED-WIR-EYPPI 423
             ||  . .| . | |. ||  | .|    ..  |||.||||||. |. ..| | | |. ||
Sbjct: 96102 SSSPSDQTDTIRKPSAGRGKRRRRNPELDESQYETEYTTGGETADDFDQDLWTR*EFAPI 95923

>Zv8_masked||Zv8_scaffold1241 |chr10|Len:362826|start:2805077|end:3167902

          Length = 362826

 Score =  44 bits (103), Expect = 0.009
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = -2

Query:    243 EAIAIVLGXXXXXXXXXXXXXXVKTRRKMDRYDKSNILWDKEHIYDEQ--PPNVEEWVKN 300
              .|||.||               .|||.... | | |||| .   .|.|  | .||.||  
Sbjct: 198776 QAIALVLDFVVIAALIIIMVFAIKTRQRINNYGKDNILWRRVKEFDDQNSPQDVEDWVSA 198597

Query:    301 V 301
              |
Sbjct: 198596 V 198594

>Zv8_masked||Zv8_scaffold590 |chr5|Len:3284637|start:23294260|end:26578896

          Length = 3284637

 Score =  44 bits (103), Expect = 0.009
 Identities = 20/32 (62%), Positives = 24/32 (75%)
 Frame = +3

Query:    490 SADYKSKKNHCKQLKSKLSHIKKMVGDYDRQK 521
              | ||. ||  ||||||||| ||. | ||| ..
Sbjct: 897597 STDYQMKKRKCKQLKSKLSLIKRRVSDYDHRQ 897692

 
    Posted date:  Mon Feb 02 16:56:45 2009
  Number of letters in database: 493,649,665
  Number of sequences in database:  14,546

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,280,994,843
Number of Sequences: 14546
Number of Extensions: 3280994843
Number of Successful Extensions: 106970508
Number of sequences better than 0.0: 0
TBLASTN 7.6.0