TBLASTN 7.6.0


Query=fugu4_753138 |jgi|Takru4|753138|estExt_fgenesh5_pg.C_590018
        (226 letters)

Database: Zv8_masked;
          14,546 sequences; 493,649,665 total letters
                                                                  Score    E

Zv8_masked||Zv8_NA5626 |chrNA|Len:63124                                 71   2e-011
Zv8_masked||Zv8_NA5626 |chrNA|Len:63124                                 71   2e-011
Zv8_masked||Zv8_scaffold2673 |chr23|Len:111483|start:11448136|en...     57   4e-007
Zv8_masked||Zv8_NA5626 |chrNA|Len:63124                                 52   1e-005

>Zv8_masked||Zv8_NA5626 |chrNA|Len:63124

          Length = 63124

 Score =  71 bits (173), Expect = 2e-011
 Identities = 32/68 (47%), Positives = 45/68 (66%)
 Frame = +3

Query:    1 MPSRQKTLYFLSSTLVTAISVGVLGYGLSTNWAIVTMDCARSDNNLFNGTAEVIYTFFNG 60
            ||| .| |.||||  .    | |||||.|||||  ...||  |.  |||.. .    |||
Sbjct: 6531 MPSSKKLLHFLSSAFLCGAGVAVLGYGMSTNWASASLECAPLDSKEFNGSSHLEIGLFNG 6710

Query:   61 TLTRDSCP 68
            | ..  ||
Sbjct: 6711 TESKFKCP 6734

>Zv8_masked||Zv8_NA5626 |chrNA|Len:63124

          Length = 63124

 Score =  71 bits (172), Expect = 2e-011
 Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
 Frame = +2

Query:   137 CLSVL-IVFVLNVTFTNLAEETVRNFTQAIPVELKNKSAEMQLGYYLVIPYAVLSLLAVG 195
             | | | ..| ..  .     ||.    .|  | |.     . ||..|.|||  ..|||. 
Sbjct: 17507 CASALSLIFYVSNAYAGEMFETLVKADEA-NVMLRKNEITLHLGFFLLIPYICVNLLAIL 17683

Query:   196 VTYMYDHTAYTHRREQQKPTEDAPKEIMMY* 226
             | |.| |  || |.||.||||||| .||..|
Sbjct: 17684 VVYLYVHAMYTRRKEQEKPTEDAPIDIMLF* 17776

>Zv8_masked||Zv8_scaffold2673 |chr23|Len:111483|start:11448136|end:11559618

          Length = 111483

 Score =  57 bits (136), Expect = 4e-007
 Identities = 24/42 (57%), Positives = 33/42 (78%)
 Frame = +1

Query:   184 IPYAVLSLLAVGVTYMYDHTAYTHRREQQKPTEDAPKEIMMY 225
             |||  ..|||. | |.| |  || |.||.||||||| .||..
Sbjct: 16690 IPYICVNLLAILVVYLYVHAMYTRRKEQEKPTEDAPIDIMLF 16815

>Zv8_masked||Zv8_NA5626 |chrNA|Len:63124

          Length = 63124

 Score =  52 bits (123), Expect = 1e-005
 Identities = 27/62 (43%), Positives = 33/62 (53%)
 Frame = +3

Query:    78 VFAMLAKIGGSSLALHSLVMSLLVLCFLFXXXXXXXXXXXXXXXPYETYMGPVGVYASSC 137
             ||  |||. |. . || ||. || |  |                ||.|||||||.|  | 
Sbjct: 13602 VFDRLAKLSGAPVILHGLVVILLALALLGSAGSILVTLYNSFSNPYQTYMGPVGLYTCSG 13781

Query:   138 LS 139
             ||
Sbjct: 13782 LS 13787

 
    Posted date:  Mon Feb 02 16:56:45 2009
  Number of letters in database: 493,649,665
  Number of sequences in database:  14,546

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,411,280,986
Number of Sequences: 14546
Number of Extensions: 3411280986
Number of Successful Extensions: 104286303
Number of sequences better than 0.0: 0
TBLASTN 7.6.0