TBLASTN 7.6.0


Query=fugu4_747798 |jgi|Takru4|747798|fgh5_pg.C_scaffold_7645000001
        (141 letters)

Database: Zv8_masked;
          14,546 sequences; 493,649,665 total letters
                                                                  Score    E

Zv8_masked||Zv8_scaffold1492 |chr12|Len:1374587|start:35972569|e...    161   3e-039
Zv8_masked||Zv8_scaffold339 |chr3|Len:299234|start:46246308|end:...     96   1e-019
Zv8_masked||Zv8_scaffold329 |chr3|Len:5518937|start:33903330|end...     68   5e-011
Zv8_masked||Zv8_scaffold34 |chr1|Len:997259|start:9322965|end:10...     64   9e-010
Zv8_masked||Zv8_scaffold339 |chr3|Len:299234|start:46246308|end:...     41   0.006

>Zv8_masked||Zv8_scaffold1492 |chr12|Len:1374587|start:35972569|end:37347155

          Length = 1374587

 Score =  161 bits (407), Expect = 3e-039
 Identities = 87/141 (61%), Positives = 90/141 (63%), Gaps = 2/141 (1%)
 Frame = -3

Query:      1 GSDSEYEVDPNRQKTHSFVNHYISDPTYYNSWRRQQKGISRAQAYSYTESESGDPDHCAX 60
              |||||||||||||||||||||||||||||||||||||||||||||.|||||||.|.||| 
Sbjct: 960414 GSDSEYEVDPNRQKTHSFVNHYISDPTYYNSWRRQQKGISRAQAYNYTESESGEPEHCA- 960238

Query:     61 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRPKGSRXXXXXXXXXXXXXXXXXLYR 120
                                               |||||||                 |||
Sbjct: 960237 -PPPPLPPLPPLPPFPPQLSSPTPQSQSQTGSLFRPKGSRTPTPSQQSSNPPSQHGTLYR 960061

Query:    121 PPSSLAPGSRAPIAGFSSFV* 141
              |||||||||||||||||||||
Sbjct: 960060 PPSSLAPGSRAPIAGFSSFV* 959998

>Zv8_masked||Zv8_scaffold339 |chr3|Len:299234|start:46246308|end:46545541

          Length = 299234

 Score =  96 bits (238), Expect = 1e-019
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +2

Query:      2 SDSEYEVDPNRQKTHSFVNHYISDPTYYNSWRRQQKGISRAQAYSYTESES 52
              ||||||.||||||||||||||||||||||||||||||.||  || | . ..
Sbjct: 110237 SDSEYELDPNRQKTHSFVNHYISDPTYYNSWRRQQKGVSRPPAYGYAQPDT 110389

>Zv8_masked||Zv8_scaffold329 |chr3|Len:5518937|start:33903330|end:39422266

          Length = 5518937

 Score =  68 bits (164), Expect = 5e-011
 Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
 Frame = -1

Query:       2 SDSEYEVDPNRQKTHSFVNHYISDPTYYNSWRRQQKGISRAQAYSYTESESGD 54
               .||| | .| .   |||||||.|||.|.|||.|||||. .  | || |  |||
Sbjct: 4200368 TDSECEEEPIK---HSFVNHYMSDPSYFNSWKRQQKGLKQTLACSYEECASGD 4200219

>Zv8_masked||Zv8_scaffold34 |chr1|Len:997259|start:9322965|end:10320223

          Length = 997259

 Score =  64 bits (153), Expect = 9e-010
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 6/55 (10%)
 Frame = -3

Query:      2 SDSEYEVDPNRQKTHSFVNHYISDPTYYNSWRRQQKGISRAQAY---SYTESESG 53
              |||.||   . |  |||||||.|||||||||.|| ||.     |   . |..| |
Sbjct: 606258 SDSDYE---DEQPKHSFVNHYMSDPTYYNSWKRQPKGVKTGGGYEECAMTDAEGG 606103

>Zv8_masked||Zv8_scaffold339 |chr3|Len:299234|start:46246308|end:46545541

          Length = 299234

 Score =  41 bits (94), Expect = 0.006
 Identities = 23/48 (47%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query:     94 FRPKGSRXXXXXXXXXXXXXXXXXLYRPPSSLAPGSRAPIAGFSSFV* 141
              |||||||                 ||||||||    . |  |||||||
Sbjct: 110495 FRPKGSR-TPTPSLLSSENHSQHTLYRPPSSLGSSGQVPATGFSSFV* 110635

 
    Posted date:  Mon Feb 02 16:56:45 2009
  Number of letters in database: 493,649,665
  Number of sequences in database:  14,546

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,332,953,197
Number of Sequences: 14546
Number of Extensions: 3332953197
Number of Successful Extensions: 108117010
Number of sequences better than 0.0: 0
TBLASTN 7.6.0