TBLASTN 7.6.0


Query=fugu4_744425 |jgi|Takru4|744425|fgh5_pg.C_scaffold_2065000005
        (505 letters)

Database: Zv8_masked;
          14,546 sequences; 493,649,665 total letters
                                                                  Score    E

Zv8_masked||Zv8_scaffold2837 |chr24|Len:162688|start:39709792|en...     70   1e-010
Zv8_masked||Zv8_scaffold2837 |chr24|Len:162688|start:39709792|en...     60   2e-007
Zv8_masked||Zv8_scaffold2344 |chr20|Len:311445|start:1947870|end...     57   2e-006
Zv8_masked||Zv8_scaffold2837 |chr24|Len:162688|start:39709792|en...     55   4e-006
Zv8_masked||Zv8_scaffold2837 |chr24|Len:162688|start:39709792|en...     45   0.005

>Zv8_masked||Zv8_scaffold2837 |chr24|Len:162688|start:39709792|end:39872479

          Length = 162688

 Score =  70 bits (171), Expect = 1e-010
 Identities = 32/76 (42%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
 Frame = -2

Query:    325 RALLVFLRQVVFHQDQNKMSLWNVSMVMSPNLFSCRRPPNEAARQQEMDQAVGGAYLVRL 384
              .||| |||.||  ...|.|..|||||...||||.      . |.|.|.  |.  | .|  
Sbjct: 113151 QALLEFLRKVVACEEKNRMNVWNVSMIVAPNLFTY---IGKNAKQEEVKSALAAAQIVCT 112981

Query:    385 MVTHQDLLWAVPNFLL 400
              ...|||||| |  ...
Sbjct: 112980 LISHQDLLWTVSGYIM 112933

>Zv8_masked||Zv8_scaffold2837 |chr24|Len:162688|start:39709792|end:39872479

          Length = 162688

 Score =  60 bits (143), Expect = 2e-007
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = -1

Query:    432 LNQITELCEGVIRVHAPLHTKVSMAIQLDGQMRARDVTCRFECD 475
              |.|. .| .|||||||||| ||||||||   |.|||.|  |. .
Sbjct: 109405 LSQVKDLRDGVIRVHAPLHAKVSMAIQLSTDMKARDITAHFDTE 109274

>Zv8_masked||Zv8_scaffold2344 |chr20|Len:311445|start:1947870|end:2259314

          Length = 311445

 Score =  57 bits (135), Expect = 2e-006
 Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 11/88 (12%)
 Frame = +3

Query:     30 EVELEEAWLTEAGLSSLVTDEATPLAAEV-LLSTLTRQQTATVKKRLHNYSETLKSRSR- 87
              | | ||||| ||||..|    |.     . ||||||| | | |..|.    .||. |.. 
Sbjct: 228786 EGEQEEAWLMEAGLATLFDQSASDGEDSIALLSTLTRTQAAAVERRVETLKQTLRKRNKP 228965

Query:     88 QPIRDVRDIFMELQPDDTA------DRC 109
                . |||.||   .|  ||      |||
Sbjct: 228966 YAVPDVREIF---KPSTTAAHSKVSDRC 229040

>Zv8_masked||Zv8_scaffold2837 |chr24|Len:162688|start:39709792|end:39872479

          Length = 162688

 Score =  55 bits (132), Expect = 4e-006
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -1

Query:     59 LLSTLTRQQTATVKKRLHNYSETLKSRSRQPIRDVRDIFMELQP 102
              ||||||  | | ||||| ||. ||. ..||| | |||.|   .|
Sbjct: 132736 LLSTLTHSQAAMVKKRLDNYTHTLRKKNRQPTRHVRDVFSTPEP 132605

>Zv8_masked||Zv8_scaffold2837 |chr24|Len:162688|start:39709792|end:39872479

          Length = 162688

 Score =  45 bits (105), Expect = 0.005
 Identities = 18/30 (60%), Positives = 26/30 (86%)
 Frame = -1

Query:    277 GVFGVPLNSLLENDRKNFPGIKVPVVFQKV 306
              |.||||| .||.|||| .|| ..|. |.||
Sbjct: 120643 GIFGVPLLTLLQNDRKIYPGSRIPLFFKKV 120554

 
    Posted date:  Mon Feb 02 16:56:45 2009
  Number of letters in database: 493,649,665
  Number of sequences in database:  14,546

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,392,339,452
Number of Sequences: 14546
Number of Extensions: 3392339452
Number of Successful Extensions: 120440556
Number of sequences better than 0.0: 0
TBLASTN 7.6.0