TBLASTN 7.6.0


Query=fugu4_742831 |jgi|Takru4|742831|fgh5_pg.C_scaffold_475000006
        (476 letters)

Database: Zv8_masked;
          14,546 sequences; 493,649,665 total letters
                                                                  Score    E

Zv8_masked||Zv8_scaffold167 |chr2|Len:1987986|start:20408816|end...     60   1e-007
Zv8_masked||Zv8_scaffold2766 |chr24|Len:3395251|start:11660774|e...     52   5e-005
Zv8_masked||Zv8_scaffold2766 |chr24|Len:3395251|start:11660774|e...     50   2e-004

>Zv8_masked||Zv8_scaffold167 |chr2|Len:1987986|start:20408816|end:22396801

          Length = 1987986

 Score =  60 bits (144), Expect = 1e-007
 Identities = 26/53 (49%), Positives = 36/53 (67%)
 Frame = +2

Query:   314 CIMSLTLLDEFHKPFWCVSSPISIVPGQMPVRNDYAGDPFFAWYEDSGGKVKI 366
             |.|.||.|||  .||||||||. .      |  .| |. |   |||. ||||.
Sbjct: 76064 CMMTLTVLDEAQRPFWCVSSPVRMSSNPRVVDVEYEGEQFIILYEDAEGKVKM 76222

>Zv8_masked||Zv8_scaffold2766 |chr24|Len:3395251|start:11660774|end:15056024

          Length = 3395251

 Score =  52 bits (122), Expect = 5e-005
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = -3

Query:     211 YTEPTFKPPFDDIDPEYGLHGYQLHFVLHDTVCELMSGSYSSLFCSKDKPLTLRFI 266
               . |   .  |||.| |.|||||  .  ||.|   |||  .| ||| . |   .|||
Sbjct: 3066734 HREARVRALFDDVDSEFGLHGYTAYIELHNTARVLMSDRFSQLFCRRGK-YRIRFI 3066570

>Zv8_masked||Zv8_scaffold2766 |chr24|Len:3395251|start:11660774|end:15056024

          Length = 3395251

 Score =  50 bits (117), Expect = 2e-004
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = -2

Query:     310 VQNGCIMSLTLLDEFHKPFWCVSSPISIVP-GQMPVRNDYAGDPFFAWYEDSGGKVKIGA 368
               .|. |..|||. ||  .||||||.|. |    |  |   . |  |   |.|| |.|..  
Sbjct: 3064458 LQDCCMISLTVWDEAKQPFWCVSAPVVITKVNQDTVSYGFDGASFSILYQDSEGRVEMRL 3064279

Query:     369 EDLSWISADVTLTNLIDTMSDQKETVRLG 397
               . . .      . ||.  .|  |     |
Sbjct: 3064278 KQMEY-KEQYFVVNLVIYISVAKVNKHFG 3064195

 
    Posted date:  Mon Feb 02 16:56:45 2009
  Number of letters in database: 493,649,665
  Number of sequences in database:  14,546

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,430,537,789
Number of Sequences: 14546
Number of Extensions: 3430537789
Number of Successful Extensions: 104528155
Number of sequences better than 0.0: 0
TBLASTN 7.6.0